BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036D02SP1|AL430211
(901 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1715 1538 0.0
>3x_Contig1715
Length = 16241
Score = 1538 bits (764), Expect = 0.0
Identities = 861/901 (95%), Gaps = 5/901 (0%)
Strand = Plus / Plus
Query: 1 tactgagcataggaatcgatatactgctgtggctgatgtctgctgcagttgaggttgawa 60
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
Sbjct: 5471 tactgagcataggaatcgatatactgctgtggctga-gtctgctgcagttgaggttgaaa 5529
Query: 61 tttagttttgttgcttgttgcattagttgcccttgattttkaatctgaggcgagggtacc 120
| |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 5530 gt-agttttgttgct-gttgcattagttgcccttgattttgaatctgaggcgagggtacc 5587
Query: 121 tgctgagactgatattgtkaggtctgcggctgaacctrcggctgaacctgctgttgckac 180
|||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||
Sbjct: 5588 tgctgagactgatattgtgaggtctgcggctgaacctgcggctgaacctgctgttgcgac 5647
Query: 181 gccaakggagagccttggactaatgcctgkccttgatcaggggtacccattgatggtttt 240
||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 5648 gccaagggagagccttggactaatgcctggccttgatcaggggtacccattgatggttgg 5707
Query: 241 aactgtttctgtaactgctgttgtakttgttcttgtacgtgttktgcattaagckatgga 300
||||||| ||||||||||||||||| ||||||||||||||||| |||||||||| |||||
Sbjct: 5708 aactgttgctgtaactgctgttgtagttgttcttgtacgtgttgtgcattaagcgatgga 5767
Query: 301 ataggggtatattttttgggcgtttctacggcartctrataatttcttggaggaattgga 360
||||||||||||| | |||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 5768 ataggggtatattgtgggggcgtttctacggcagtctgataatttcttggaggaattggt 5827
Query: 361 tcaggatgaagctgctgcattggtctgtctgcgataactgctkcccttkctktgggattt 420
||||||||||||||||||||||| ||| |||||||||||||| |||| || ||||||||
Sbjct: 5828 tcaggatgaagctgctgcattgg-ctg-ctgcgataactgctgccctggctgtgggattt 5885
Query: 421 gctktacttktggtggtacttgctgtttcattggcggttgttgtggcggttgttgtttwt 480
||| ||||| ||||||||||||||||| ||||||||||||| ||||||||||||||| |
Sbjct: 5886 gctgtacttgtggtggtacttgctgttgcattggcggttgtggtggcggttgttgttgat 5945
Query: 481 wyatattctgcggaggatacgtttgttgctgagtaagcataggaatactgttcgctttcg 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 5946 acatattctgcggaggatacgtttgttgctgagtaagcataggaatactgttcgctgtcg 6005
Query: 541 gtgttcttggaggcaaccctgggtgtgaagcagcattggccatcggcacagcagcantat 600
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 6006 gtgttcttggaggcaaccctgggtgtgaagcagcattggccatcggcacagcagcagtat 6065
Query: 601 gcaccagaggagcgttaccagcatcaatgacagtcccatcactggatatctgtttctgtc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6066 gcaccagaggagcgttaccagcatcaatgacagtcccatcactggatatctgtttctgtc 6125
Query: 661 ccggttttaaaggaggcggtggaaacatcttaggatcttgtaaatgagacaaatctgaag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6126 ccggttttaaaggaggcggtggaaacatcttaggatcttgtaaatgagacaaatctgaag 6185
Query: 721 ccgattcgctcatatagccttcatcggaactctcctcaacattcttcttgccttgggaat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6186 ccgattcgctcatatagccttcatcggaactctcctcaacattcttcttgccttgggaat 6245
Query: 781 tgttataatgcgtcttactggccttataccctgcctttgctacatatttcgtgccctgat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6246 tgttataatgcgtcttactggccttataccctgcctttgctacatatttcgtgccctgat 6305
Query: 841 aaccatattttccggcgcttgccagaccagacataatactgcccttgttattatyccaaa 900
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 6306 aaccatattttccggcgcttgccagaccagacataatactgcccttgttattatcccaaa 6365
Query: 901 a 901
|
Sbjct: 6366 a 6366
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.32
Gapped
Lambda K H
1.40 0.714 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3813
Number of Sequences: 1807
Number of extensions: 3813
Number of successful extensions: 75
Number of sequences better than 1.0e-20: 1
length of query: 901
length of database: 10,358,551
effective HSP length: 16
effective length of query: 885
effective length of database: 10,329,639
effective search space: 9141730515
effective search space used: 9141730515
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.6 bits)
S2: 50 (101.2 bits)